BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036E05LP1|AL430240
(895 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1789 1746 0.0
>3x_Contig1789
Length = 30977
Score = 1746 bits (881), Expect = 0.0
Identities = 895/897 (99%), Gaps = 2/897 (0%)
Strand = Plus / Minus
Query: 1 gatcagtaaacttcgagtacaacgactgcgagttcgatataagcctgatgaaatcatcgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23702 gatcagtaaacttcgagtacaacgactgcgagttcgatataagcctgatgaaatcatcgt 23643
Query: 61 accttaacaccgactcaccagtctctccggagtccgaaacatcgctagcatacggttctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23642 accttaacaccgactcaccagtctctccggagtccgaaacatcgctagcatacggttctc 23583
Query: 121 ccagctttttctgctcagcagtaagcacactggcatatttgctaaacacctccagctgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23582 ccagctttttctgctcagcagtaagcacactggcatatttgctaaacacctccagctgct 23523
Query: 181 gcttctttttctcgctattcgaattcactagttccatctttgcatgttgttatatgtctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23522 gcttctttttctcgctattcgaattcactagttccatctttgcatgttgttatatgtctt 23463
Query: 241 taatactttttgccttgcttctatttctgtgtctctctttaaatcatataataaataata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23462 taatactttttgccttgcttctatttctgtgtctctctttaaatcatataataaataata 23403
Query: 301 acgtaaacgtaaaatgccttaacgaatgataaaatgcattcaaatcttgacttcttgaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23402 acgtaaacgtaaaatgccttaacgaatgataaaatgcattcaaatcttgacttcttgaca 23343
Query: 361 atgtaacgaatgttcaacccagataactaaaagatatgcacaaacgaaattattcaaagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23342 atgtaacgaatgttcaacccagataactaaaagatatgcacaaacgaaattattcaaagt 23283
Query: 421 atgaaatatcaccttgtctcacagcttcatttaatgctggacggatcagagagatgcttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23282 atgaaatatcaccttgtctcacagcttcatttaatgctggacggatcagagagatgcttc 23223
Query: 481 taaaataaataaaatgtgcctgtttccaaaacagttttggcagcgaaatctaacttccca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23222 taaaataaataaaatgtgcctgtttccaaaacagttttggcagcgaaatctaacttccca 23163
Query: 541 actgttggctgaacgatacaggattaaatacgaactaaacaacgttaatgtaatgatgtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23162 actgttggctgaacgatacaggattaaatacgaactaaacaacgttaatgtaatgatgtt 23103
Query: 601 aaatccagtttccaatctcgtgttggccatctctaacagcttctttgtatttgaaccgat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23102 aaatccagtttccaatctcgtgttggccatctctaacagcttctttgtatttgaaccgat 23043
Query: 661 tcaaagctgtgatctttttttgggcaaaaagatttttccgggccctcgaaaacggagttt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23042 tcaaagctgtgatctttttttgggcaaaaagatttttccgggccctcgaaaacggagttt 22983
Query: 721 ctggtggaatttcggctccgattctttcaatgtgcttacgttaccccagaaacattgttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22982 ctggtggaatttcggctccgattctttcaatgtgcttacgttaccccagaaacattgttt 22923
Query: 781 tagggacccaaattcggatttctggcccgctcggg-cgca-ggtctttccaatggagatt 838
||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct: 22922 tagggacccaaattcggatttctggcccgctcgggccgcagggtctttccaatggagatt 22863
Query: 839 ggagcttggacatcaggtcatgtgacctgaaagtgttttacctatatttcatggtaa 895
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22862 ggagcttggacatcaggtcatgtgacctgaaagtgttttacctatatttcatggtaa 22806
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6830
Number of Sequences: 1807
Number of extensions: 6830
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 895
length of database: 10,358,551
effective HSP length: 16
effective length of query: 879
effective length of database: 10,329,639
effective search space: 9079752681
effective search space used: 9079752681
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)